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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015911705.1_cds_XP_016461733.1_55028
CDS Infomation

[gene=LOC107785029] [db_xref=GeneID:107785029] [protein=ankyrin repeat-containing protein At5g02620-like isoform X1] [protein_id=XP_016461733.1] [location=join(45223..45511,46292..46768,46946..47095,47219..47290,47384..47431,47523..48664)] [gbkey=CDS]
Sequence

ATGGAAAACATCCAAAAACTACAACTGGAACGTACACTTTCAATTCCAACATGTTTCCCG
CAGAGAAACTCAGTACCAAGCACTACACCAACATCAGAAGGGGTATCTTTGAGAAACAGC
AGCTTCAATACAAGCAGCTTTACTCCGCAGCATGATGTTGCAATTCAATTAAATCAGGGA
ATTAGTCAAGCTGATTCTACAGTGCTGCCTTCTCCCATTCAAACGGAAGCTGTCTCTAGG
CCTATCGCTCCTGCTCCTCAGACACTTCCCACTTCCTTCCTCAGGCCCAGGACTAAACCT
ATAAACCTTACCATGTATGTGCCACTTTGCCAAGCAGCACTAGGAGGTGATTGGGAGAAG
GCTAGAGAATTTTTCAGTCTGCACCCTGGTGCAACATCTGCCAGGATTACCAAAGGGTGG
GAGACTGCTCTTCATATTGCAGCCGGGGCTAACAAGGTTCAGTTTGTTGAAGAACTGGTT
AAACTTATGAGTCCACTGGAACTGGCACTGCAAAACAAATATGATAATACTGCACTTTGC
TTTGCTGCTGCATCTGGACTCACAAGGATCGCAAAAGTTATGGTAATGAAAAATCAATTC
TTGCCAATAGTGAGGGGCAGCAAGGGAGTCACACCACTGCACATGGCTGCTCTACTAGGG
CACAGAGAGATGGTGTGGTATCTTTATTCAGTGACAGATCATCAGTATCTATGCAAAGAC
GACTATATCAGCCTGCTGATTGCTACTATAAACTCCAATCTATTTGATGTTGCTTTACAT
ATACTTCAGCACATGCCTGAATTAGGCATTGAACGAGATCAAAATGGAGACACAATACTT
CATGTTTTAGCGCGAAAGCCCTTGGCATTTTCTGACAAAATTGGACTTGGTATCTGGCAA
AGATTTCTTTACGCATATGTCTCTGTTCATTTACAGAATAGATCAAGCAACATGTCCAGC
GGATCAAGGATAAAAAATAACACTAAGGCTAGCGCGTTCATCACAAGGGTAGTTCAGCAT
CTACTAAAAACATTAGGAATCAAAGAAGTTCTGGAGACAAAATTAATGCACTTACAAGCA
CTTGAATTGGTAAAATGTTCATGGAAAGAAGTTCTCTTGTTGAATGATTCACAAATAGGG
AACTTACTTAGAAGTCCGTCGCGGCCATTGTTTGTAGCAGCAGAGTTGGGAAATTTTAAG
TTCATAGTTGAGCTTATTCAGTCTTATCCAGATCTCATTTGGAAGGTTGATGAGGAAAGC
CGGAGCATCTTTCACATTGCAGTCATTCACCGCCAAGAAAAGATCTACAAACTTATCTAC
AACATAGGAGCACACAAGGATATAATTACGTCCTATAAAAGTAGAAATAATGAGAACATT
TTACACTTGGCAGCAAAGTTGGCTCCTACAAATCGACTTGGTATTGTTTCAGGTGCAGCA
CTCCAGATGCAGCGGGAGTTATTGTGGTTCAAGGTAATTTCCACATCTGGTGAAATGCTG
CTTCCCTATTACGTATACTCTCTTTCTATATTTCATAAGATATTACTTCTTATCATTCCA
AAGGAAGTTAAGACAATTGTTCAAGCCTCATATAAGGAGATGAGAGACTCAAAAGGTCGA
ACACCTGGAATGTTGTTCGCTGAAGAACACAAGGAATTGGTCAAAGAAGGAGAGAAGTGG
ATGAAGGAAACTGCATCATCTTGCATGCTTGTTGCTGCACTAATTACAACAGTAATGTTT
GCAGCAATCTTTACCGTGCCAGGAGGGAACAACGATGATACAGGCACCCCCATTTTTCTT
AAAGAGAAAACATTCATTCTTTTCTCTATAACAGATGCACTAGCACTGTTTTCTTCAGTA
ACCTCTATATTGATGTTCTTGTCCATCCTCACTTCACGCTATGCCGAAGAAGACTTCCTG
AGTACTTTACCAAAAAGGTTAATCCTTGGCTTCATCACGCTCTTTGTTGCTATAGCAGCG
ATGCTAGTAGCATTTAGTTCAAGTTTTTTCATCGTACTTGGGCATCAAATGGCCTGGATT
ATCATCCCAGTGGCAGTACTTGCTAGTATTCCCATAACTTTATTTGCATTTCTGCAATTT
CCTCTCTTGGCTGATATGATCAGATCTACCTATGGCTCAGGAATATTCACTTTTACAAGT
AAAGATACGATTTATTGA

Peptide Sequence

PEP ID

XP_016461733.1
PEP Infomation

PREDICTED: ankyrin repeat-containing protein At5g02620-like isoform X1 [Nicotiana tabacum]
Sequence

MENIQKLQLERTLSIPTCFPQRNSVPSTTPTSEGVSLRNSSFNTSSFTPQHDVAIQLNQG
ISQADSTVLPSPIQTEAVSRPIAPAPQTLPTSFLRPRTKPINLTMYVPLCQAALGGDWEK
AREFFSLHPGATSARITKGWETALHIAAGANKVQFVEELVKLMSPLELALQNKYDNTALC
FAAASGLTRIAKVMVMKNQFLPIVRGSKGVTPLHMAALLGHREMVWYLYSVTDHQYLCKD
DYISLLIATINSNLFDVALHILQHMPELGIERDQNGDTILHVLARKPLAFSDKIGLGIWQ
RFLYAYVSVHLQNRSSNMSSGSRIKNNTKASAFITRVVQHLLKTLGIKEVLETKLMHLQA
LELVKCSWKEVLLLNDSQIGNLLRSPSRPLFVAAELGNFKFIVELIQSYPDLIWKVDEES
RSIFHIAVIHRQEKIYKLIYNIGAHKDIITSYKSRNNENILHLAAKLAPTNRLGIVSGAA
LQMQRELLWFKVISTSGEMLLPYYVYSLSIFHKILLLIIPKEVKTIVQASYKEMRDSKGR
TPGMLFAEEHKELVKEGEKWMKETASSCMLVAALITTVMFAAIFTVPGGNNDDTGTPIFL
KEKTFILFSITDALALFSSVTSILMFLSILTSRYAEEDFLSTLPKRLILGFITLFVAIAA
MLVAFSSSFFIVLGHQMAWIIIPVAVLASIPITLFAFLQFPLLADMIRSTYGSGIFTFTS
KDTIY

Transcript Sequence

Gene sequence data has not been registered.